HPV Target gene Detail Information

> SYCN Gene Search Result

Gene Information

Gene Name	SYCN
Gene ID	342898
Gene Full Name	syncollin
Gene Alias	SYL; INSSA1
Transcripts	ENSG00000179751
Virus	HPV
Gene Type	protein coding
HPA Location Info
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q0VAF6
HGNC ID	HGNC:18442
VEGA ID	OTTHUMG00000182803
String ID	9606.ENSP00000325564
PharmGKB ID	PA142670850

Target gene [SYCN] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5201934	chr19	121	16		137	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).