HTLV1 Target gene Detail Information

> TBC1D30 Gene Search Result

Gene Information

Gene Name	TBC1D30
Gene ID	23329
Gene Full Name	TBC1 domain family member 30
Transcripts	ENSG00000111490
Virus	HTLV1
Gene Type	protein coding
HPA Location Info	Plasma membrane;Cytosol;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID	Q9Y2I9
HGNC ID	HGNC:29164
VEGA ID	OTTHUMG00000168824
OMIM ID	615077
String ID	9606.ENSP00000440207
PharmGKB ID	PA162405327

Target gene [TBC1D30] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6006673	chr12	30	26	9	65	View
6017277	chr12	10	1		11	View
6021493	chr12	4	1	1	6	View
6025207	chr12	3			3	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE55851 (GEO)	Adult T-cell leukemia	21	Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)

> Dataset: GSE55851
HeatMap of cell type fractions in all samples	Lollipop of TBC1D30 expression and immune infiltrating cell level correlation result in HTLV1+ samples
TBC1D30 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).