HIV Target gene Detail Information

> TNRC6A Gene Search Result

Gene Information

Gene Name	TNRC6A
Gene ID	27327
Gene Full Name	trinucleotide repeat containing 6A
Gene Alias	GW1; FAME6; GW182; TNRC6; CAGH26
Transcripts	ENSG00000288130
Virus	HIV
Gene Type	protein coding
HPA Location Info	Golgi apparatus;Nucleoplasm;Vesicles;
HPA Protein Class Info	Plasma proteins, Predicted intracellular proteins
Uniport_ID	Q8NDV7
HGNC ID	HGNC:11969
VEGA ID	OTTHUMG00000096999
OMIM ID	610739
String ID	9606.ENSP00000379144
PharmGKB ID	PA36656

Target gene [TNRC6A] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4000744	chr16	46	123	132	301	View
4001634	chr16	19	100	25	144	View
4001635	chr16	19	100	25	144	View
4001636	chr16	19	100	25	144	View
4001637	chr16	19	100	25	144	View
4005696	chr16	26	4		30	View
4006871	chr16	13	7	2	22	View
4007424	chr16	19			19	View
4009655	chr16	8	3		11	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).