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EBV Target gene Detail Information

> TRIM16L Gene Search Result


Gene Information
Gene Name TRIM16L
Gene ID 147166
Gene Full Name tripartite motif containing 16 like
Gene Alias TRIM70
Transcripts ENSG00000108448
Virus EBV
Gene Type protein coding
HPA Location Info Cytosol;Plasma membrane;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q309B1
HGNC ID HGNC:32670
VEGA ID OTTHUMG00000059050
String ID 9606.ENSP00000461386
PharmGKB ID PA144596249
Target gene [TRIM16L] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
3000201 chr17 73 1 74 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE102203 (GEO) B-cell lymphoma 9 Plasmablastic lymphomas (EBV+)(6), Plasmablastic lymphomas (EBV-)(3)
GSE100458 (GEO) Burkitt lymphoma 14 Burkitt lyphoma cell line Akata(EBV+)(2),Burkitt lyphoma cell line Akata(EBV-)(2),Burkitt lyphoma cell line Awia(EBV+)(2),Burkitt lyphoma cell line Awia(EBV-)(2),Burkitt lyphoma cell line Eli(EBV+)(1),Burkitt lyphoma cell line Eli(EBV-)(1),Burkitt lyphoma cell line Mutu(EBV+)(2),Burkitt lyphoma cell line Mutu(EBV-)(2)
GSE45919 (GEO) Infectious mononucleosis 24 Infectious mononucleosis (IM)(EBV+)(3), Normal (9), Latent EBV (12)
GSE85599 (GEO) Infectious mononucleosis 17 Chronic active EBV infection (EBV+)(5), Acute infectious mononucleosis (EBV+)(6), Normal (6)
GSE58240 (GEO) Multiple sclerosis 32 Multiple sclerosis IFN-β treated (EBV+)(16), Multiple sclerosis untreated (EBV+)(16)

> Dataset: GSE102203

HeatMap of cell type fractions in all samples Lollipop of TRIM16L expression and immune infiltrating cell level correlation result in EBV+ samples
TRIM16L expression: Low -> High

> Dataset: GSE100458

HeatMap of cell type fractions in all samples Lollipop of TRIM16L expression and immune infiltrating cell level correlation result in EBV+ samples
TRIM16L expression: Low -> High

> Dataset: GSE45919

HeatMap of cell type fractions in all samples Lollipop of TRIM16L expression and immune infiltrating cell level correlation result in EBV+ samples
TRIM16L expression: Low -> High

> Dataset: GSE85599

HeatMap of cell type fractions in all samples Lollipop of TRIM16L expression and immune infiltrating cell level correlation result in EBV+ samples
TRIM16L expression: Low -> High

> Dataset: GSE58240

HeatMap of cell type fractions in all samples Lollipop of TRIM16L expression and immune infiltrating cell level correlation result in EBV+ samples
TRIM16L expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).