HBV Target gene Detail Information

> UBXN8 Gene Search Result


Gene Information
Gene Name UBXN8
Gene ID 7993
Gene Full Name UBX domain protein 8
Gene Alias REP8; UBXD6; D8S2298E
Transcripts ENSG00000104691
Virus HBV
Gene Type protein coding
HPA Location Info Endoplasmic reticulum;Nucleoli;Nucleoplasm;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID O00124
HGNC ID HGNC:30307
VEGA ID OTTHUMG00000163851
OMIM ID 602155
String ID 9606.ENSP00000479216
PharmGKB ID PA162408474
Target gene [UBXN8] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1008006 chr8 23 23 View
1009934 chr8 14 14 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of UBXN8 expression and immune infiltrating cell level correlation result in HBV+ samples
UBXN8 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).