EBV Target gene Detail Information

> VPS50 Gene Search Result

Gene Information

Gene Name	VPS50
Gene ID	55610
Gene Full Name	VPS50, EARP/GARPII complex subunit
Gene Alias	VPS54L; CCDC132
Transcripts	ENSG00000004766
Virus	EBV
Gene Type	protein coding
HPA Location Info	Cytosol;Plasma membrane;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q96JG6
HGNC ID	HGNC:25956
VEGA ID	OTTHUMG00000131733
OMIM ID	616465
PharmGKB ID	PA162381332

Target gene [VPS50] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
3000724	chr7	5			5	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE100458 (GEO)	Burkitt lymphoma	14	Burkitt lyphoma cell line Akata(EBV+)(2),Burkitt lyphoma cell line Akata(EBV-)(2),Burkitt lyphoma cell line Awia(EBV+)(2),Burkitt lyphoma cell line Awia(EBV-)(2),Burkitt lyphoma cell line Eli(EBV+)(1),Burkitt lyphoma cell line Eli(EBV-)(1),Burkitt lyphoma cell line Mutu(EBV+)(2),Burkitt lyphoma cell line Mutu(EBV-)(2)

> Dataset: GSE100458
HeatMap of cell type fractions in all samples	Lollipop of VPS50 expression and immune infiltrating cell level correlation result in EBV+ samples
VPS50 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).