Detail information
ID ENOM00121
Accession GSE171282
Status Public on Jan 13, 2022
Title Lidocaine and bupivacaine downregulate MYB protein and LncRNA DANCR through interaction with miR-187-5p in MCF7 cells
Organism Homo sapiens
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary
In order to identify microRNAs (miRNAs) that were involved in the effects of anesthetics on breast cancer cells, Illumina next generation miRNA sequencing was performed to search for any differentially expressed miRNAs in responding to lidocaine and bupivacaine treatments in MCF7 breast cancer cells. The filtering criteria for identifying differentially expressed miRNAs in the lidocaine and bupivacaine groups were fold change ≥ 2.0X and P-value ≤ 0.05. In total, there were 1,228 significantly upregulated miRNAs in lidocaine group and 133 miRNAs in bupivacaine group. On the contrary, there were 25 significantly downregulated miRNAs in lidocaine group and 36 miRNAs in bupivacaine group.
Samples
GSM ID Sample info Characteristics Description
GSM5221841 C1_S1_R1_001 cell type: epithelial cell line: MCF7 treatment: untreated microRNA_exp_microRN.csv
GSM5221842 C2_S2_R1_001 cell type: epithelial cell line: MCF7 treatment: untreated microRNA_exp_microRN.csv
GSM5221843 C3_S3_R1_001 cell type: epithelial cell line: MCF7 treatment: untreated microRNA_exp_microRN.csv
GSM5221844 B1_S4_R1_001 cell type: epithelial cell line: MCF7 treatment: treated with 1 mM bupivacaine for 6 hours microRNA_exp_microRN.csv
GSM5221845 B2_S5_R1_001 cell type: epithelial cell line: MCF7 treatment: treated with 1 mM bupivacaine for 6 hours microRNA_exp_microRN.csv
GSM5221846 B3_S6_R1_001 cell type: epithelial cell line: MCF7 treatment: treated with 1 mM bupivacaine for 6 hours microRNA_exp_microRN.csv
GSM5221847 L1_S7_R1_001 cell type: epithelial cell line: MCF7 treatment: treated with 4 mM lidocaine for 6 hours microRNA_exp_microRN.csv
GSM5221848 L2_S8_R1_001 cell type: epithelial cell line: MCF7 treatment: treated with 4 mM lidocaine for 6 hours microRNA_exp_microRN.csv
GSM5221849 L3_S9_R1_001 cell type: epithelial cell line: MCF7 treatment: treated with 4 mM lidocaine for 6 hours microRNA_exp_microRN.csv
Platform GPL18573: Illumina NextSeq 500 (Homo sapiens)
Indicator
miR-187-5p, MYB, DANCR
Download Download data in GEO database