Detail information
ID ENOM00131
Accession GSE1616
Status Public on Jul 30, 2004
Title Genomics of preconditioning
Organism Rattus norvegicus
Experiment type Expression profiling by array
Summary
Isolated perfused rat hearts exposed to isoflurane or ischemic preconditioning, a subgroup followed by 40 minutes of ischemia and 3 hours of reperfusion. Exact protocol available from the authors. Keywords = preconditioning Keywords = anesthetics Keywords = ischemia/reperfusion Keywords: other
Samples
GSM ID Sample info Characteristics Description
GSM27484 APC_a (anesthetic-preconditioning, 1st replicate) RNA was extracted and handled using standard and recommended Affymetrix procedures. For each treatment protocol, 5 biological replicates were analyzed. Keywords = rat, heart left ventricle, comparison between ischemia/reperfusion and pharmacological/ischemic preconditioning
GSM27485 APC_b (anesthetic-preconditioning, 2nd replicate) RNA was extracted and handled using standard and recommended Affymetrix procedures. For each treatment protocol, 5 biological replicates were analyzed. Keywords = rat, heart left ventricle, comparison between ischemia/reperfusion and pharmacological/ischemic preconditioning
GSM27486 APC_c (anesthetic-preconditioning, 3rd replicate) RNA was extracted and handled using standard and recommended Affymetrix procedures. For each treatment protocol, 5 biological replicates were analyzed. Keywords = rat, heart left ventricle, comparison between ischemia/reperfusion and pharmacological/ischemic preconditioning
GSM27487 APC_d (anesthetic-preconditioning, 4th replicate) RNA was extracted and handled using standard and recommended Affymetrix procedures. For each treatment protocol, 5 biological replicates were analyzed. Keywords = rat, heart left ventricle, comparison between ischemia/reperfusion and pharmacological/ischemic preconditioning
GSM27488 APC_e (anesthetic-preconditioning, 5th replicate) RNA was extracted and handled using standard and recommended Affymetrix procedures. For each treatment protocol, 5 biological replicates were analyzed. Keywords = rat, heart left ventricle, comparison between ischemia/reperfusion and pharmacological/ischemic preconditioning
GSM27489 APC_TRI_a (trigger of anesthetic-preconditioning, 1st replicate) RNA was extracted and handled using standard and recommended Affymetrix procedures. For each treatment protocol, 5 biological replicates were analyzed. Keywords = rat, heart left ventricle, comparison between ischemia/reperfusion and pharmacological/ischemic preconditioning
GSM27490 APC_TRI_b (trigger of anesthetic-preconditioning, 2nd replicate) RNA was extracted and handled using standard and recommended Affymetrix procedures. For each treatment protocol, 5 biological replicates were analyzed. Keywords = rat, heart left ventricle, comparison between ischemia/reperfusion and pharmacological/ischemic preconditioning
GSM27491 APC_TRI_c (trigger of anesthetic-preconditioning, 3rd replicate) RNA was extracted and handled using standard and recommended Affymetrix procedures. For each treatment protocol, 5 biological replicates were analyzed. Keywords = rat, heart left ventricle, comparison between ischemia/reperfusion and pharmacological/ischemic preconditioning
GSM27492 APC_TRI_d (trigger of anesthetic-preconditioning, 4th replicate) RNA was extracted and handled using standard and recommended Affymetrix procedures. For each treatment protocol, 5 biological replicates were analyzed. Keywords = rat, heart left ventricle, comparison between ischemia/reperfusion and pharmacological/ischemic preconditioning
GSM27493 APC_TRI_e (trigger of anesthetic-preconditioning, 5th replicate) RNA was extracted and handled using standard and recommended Affymetrix procedures. For each treatment protocol, 5 biological replicates were analyzed. Keywords = rat, heart left ventricle, comparison between ischemia/reperfusion and pharmacological/ischemic preconditioning
GSM27494 CTL_a (control, 1st replicate) RNA was extracted and handled using standard and recommended Affymetrix procedures. For each treatment protocol, 5 biological replicates were analyzed. Keywords = rat, heart left ventricle, comparison between ischemia/reperfusion and pharmacological/ischemic preconditioning
GSM27495 CTL_b (control, 2nd replicate) RNA was extracted and handled using standard and recommended Affymetrix procedures. For each treatment protocol, 5 biological replicates were analyzed. Keywords = rat, heart left ventricle, comparison between ischemia/reperfusion and pharmacological/ischemic preconditioning
GSM27496 CTL_c (control, 3rd replicate) RNA was extracted and handled using standard and recommended Affymetrix procedures. For each treatment protocol, 5 biological replicates were analyzed. Keywords = rat, heart left ventricle, comparison between ischemia/reperfusion and pharmacological/ischemic preconditioning
GSM27497 CTL_d (control, 4th replicate) RNA was extracted and handled using standard and recommended Affymetrix procedures. For each treatment protocol, 5 biological replicates were analyzed. Keywords = rat, heart left ventricle, comparison between ischemia/reperfusion and pharmacological/ischemic preconditioning
GSM27498 CTL_e (control, 5th replicate) RNA was extracted and handled using standard and recommended Affymetrix procedures. For each treatment protocol, 5 biological replicates were analyzed. Keywords = rat, heart left ventricle, comparison between ischemia/reperfusion and pharmacological/ischemic preconditioning
GSM27499 IPC_a (ischemic preconditioning, 1st replicate) RNA was extracted and handled using standard and recommended Affymetrix procedures. For each treatment protocol, 5 biological replicates were analyzed. Keywords = rat, heart left ventricle, comparison between ischemia/reperfusion and pharmacological/ischemic preconditioning
GSM27500 IPC_b (ischemic preconditioning, 2nd replicate) RNA was extracted and handled using standard and recommended Affymetrix procedures. For each treatment protocol, 5 biological replicates were analyzed. Keywords = rat, heart left ventricle, comparison between ischemia/reperfusion and pharmacological/ischemic preconditioning
GSM27501 IPC_c (ischemic preconditioning, 3rd replicate) RNA was extracted and handled using standard and recommended Affymetrix procedures. For each treatment protocol, 5 biological replicates were analyzed. Keywords = rat, heart left ventricle, comparison between ischemia/reperfusion and pharmacological/ischemic preconditioning
GSM27502 IPC_d (ischemic preconditioning, 4th replicate) RNA was extracted and handled using standard and recommended Affymetrix procedures. For each treatment protocol, 5 biological replicates were analyzed. Keywords = rat, heart left ventricle, comparison between ischemia/reperfusion and pharmacological/ischemic preconditioning
GSM27503 IPC_e (ischemic preconditioning, 5th replicate) RNA was extracted and handled using standard and recommended Affymetrix procedures. For each treatment protocol, 5 biological replicates were analyzed. Keywords = rat, heart left ventricle, comparison between ischemia/reperfusion and pharmacological/ischemic preconditioning
GSM27504 IPC_TRI_a (trigger of ischemic preconditioning, 1st replicate) RNA was extracted and handled using standard and recommended Affymetrix procedures. For each treatment protocol, 5 biological replicates were analyzed. Keywords = rat, heart left ventricle, comparison between ischemia/reperfusion and pharmacological/ischemic preconditioning
GSM27505 IPC_TRI_b (trigger of ischemic preconditioning, 2nd replicate) RNA was extracted and handled using standard and recommended Affymetrix procedures. For each treatment protocol, 5 biological replicates were analyzed. Keywords = rat, heart left ventricle, comparison between ischemia/reperfusion and pharmacological/ischemic preconditioning
GSM27506 IPC_TRI_c (trigger of ischemic preconditioning, 3rd replicate) RNA was extracted and handled using standard and recommended Affymetrix procedures. For each treatment protocol, 5 biological replicates were analyzed. Keywords = rat, heart left ventricle, comparison between ischemia/reperfusion and pharmacological/ischemic preconditioning
GSM27507 IPC_TRI_d (trigger of ischemic preconditioning, 4th replicate) RNA was extracted and handled using standard and recommended Affymetrix procedures. For each treatment protocol, 5 biological replicates were analyzed. Keywords = rat, heart left ventricle, comparison between ischemia/reperfusion and pharmacological/ischemic preconditioning
GSM27508 IPC_TRI_e (trigger of ischemic preconditioning, 5th replicate) RNA was extracted and handled using standard and recommended Affymetrix procedures. For each treatment protocol, 5 biological replicates were analyzed. Keywords = rat, heart left ventricle, comparison between ischemia/reperfusion and pharmacological/ischemic preconditioning
GSM27509 ISCH_a (ischemia, 1st replicate) RNA was extracted and handled using standard and recommended Affymetrix procedures. For each treatment protocol, 5 biological replicates were analyzed. Keywords = rat, heart left ventricle, comparison between ischemia/reperfusion and pharmacological/ischemic preconditioning
GSM27510 ISCH_b (ischemia, 2nd replicate) RNA was extracted and handled using standard and recommended Affymetrix procedures. For each treatment protocol, 5 biological replicates were analyzed. Keywords = rat, heart left ventricle, comparison between ischemia/reperfusion and pharmacological/ischemic preconditioning
GSM27511 ISCH_c (ischemia, 3rd replicate) RNA was extracted and handled using standard and recommended Affymetrix procedures. For each treatment protocol, 5 biological replicates were analyzed. Keywords = rat, heart left ventricle, comparison between ischemia/reperfusion and pharmacological/ischemic preconditioning
GSM27512 ISCH_d (ischemia, 4th replicate) RNA was extracted and handled using standard and recommended Affymetrix procedures. For each treatment protocol, 5 biological replicates were analyzed. Keywords = rat, heart left ventricle, comparison between ischemia/reperfusion and pharmacological/ischemic preconditioning
GSM27513 ISCH_e (ischemia, 5th replicate) RNA was extracted and handled using standard and recommended Affymetrix procedures. For each treatment protocol, 5 biological replicates were analyzed. Keywords = rat, heart left ventricle, comparison between ischemia/reperfusion and pharmacological/ischemic preconditioning
Platform GPL85: [RG_U34A] Affymetrix Rat Genome U34 Array
Indicator
Egr-1, Zf36, ATF3, Gadd45α, DEAF-1, heat shock protein (Hsp) 40, Hsp70, Hsp90 , cytochrome P-450, hexokinase, zf36, rhoB, Hsp10, Hsp20, LINEs, endothelin receptor type B, caspase 3, nuclear targeting protein phosphatase 1
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