Overview of Virus Integration Site (VIS)-Cistrome Factor Feature

This feature provides information of the overlapped records between VIS and Cistrome factors as well as Cistrome factor-related samples, the associated factor and overlap amount could indicate that the virus integration site is a potentially functional DNA element.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."
The table below shows a summary about VIS we collected as well as VIS-Cistrome factor overlapped records in each virus.

Virus	VIS Count	VIS-Cistrome Overlap	Disease Information
Hepatitis B Virus (HBV)	43541	10447291	Carcinoma, Hepatocellular Hepatitis B, Chronic Occult HBV Infection Cholangiocarcinoma Lymphoma, Non-Hodgkin
Human Papillomavirus (HPV)	17961	3924045	Papillomavirus Infections Cervical Intraepithelial Neoplasia Uterine Cervical Neoplasms Oropharyngeal Neoplasms Squamous Cell Carcinoma of Head and Neck Carcinoma, Neuroendocrine Adenocarcinoma, Clear Cell Anal Intraepithelial Neoplasia Urinary Bladder Neoplasms
Epstein-Barr Virus (EBV)	1513	309437	Lymphoma, B-Cell Burkitt Lymphoma Lymphoma, Extranodal NK-T-Cell Stomach Neoplasms Hodgkin Disease Lung Neoplasms Nasopharyngeal Carcinoma
Merkel Cell Polyomavirus (MCV)	66	227180	Carcinoma, merkel cell
Human Immunodeficiency Virus (HIV)	17361	1192601	HIV Infections Acquired Immunodeficiency Syndrome Lymphoma, AIDS-Related Immunoblastic Lymphadenopathy AIDS Dementia Complex
Human T-lymphotropic Virus 1 (HTLV1)	34527	3906810	Paraparesis, Tropical Spastic Leukemia-Lymphoma, Adult T-Cell
Xenotropic Murine Leukemia Virus-Related Virus (XMRV)	64	185022	Prostatic Neoplasms Small Cell Lung Carcinoma Squamous Cell Carcinoma of Head and Neck Neuroblastoma

Search VIS-Cistrome Overlap

Advanced search option for sophisticated overlapped records searches by combining various keywords (e.g. virus name, chromosome, location, disease, Cistrome biological source or Cistrome type).

Explore VIS batch (list)

This module supports user provided list of integration sites to search VIS batch.

Contents Description and
Data Download

Click Virus name to view virus overview of virus mutation, integration and target gene.

Click VIS count number (green button) to view VIS-Cistrome factor data.

Click Disease Information to display the summary of this disease and disease related literature.