HBV Target gene Detail Information

> AGA-DT Gene Search Result


Gene Information
Gene Name AGA-DT
Gene ID 285500
Gene Full Name AGA divergent transcript
Gene Alias -
Transcripts ENSG00000250131
Virus HBV
Gene Type ncRNA
HGNC ID HGNC:27730
Target gene [AGA-DT] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1008395 chr4 6 7 8 21 View
1016351 chr4 1 0 0 1 View
1017536 chr4 0 0 0 0 View
1019381 chr4 0 0 0 0 View

Target gene [AGA-DT] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - AGA-DT peak across samples

Peak Plot

> Dataset: GSE68402 - AGA-DT peak across samples

Peak Plot

> Dataset: GSE100400 - AGA-DT peak across samples

Peak Plot

> Dataset: GSE131257 - AGA-DT peak across samples

Peak Plot