HBV Target gene Detail Information

> AGBL1 Gene Search Result


Gene Information
Gene Name AGBL1
Gene ID 123624
Gene Full Name AGBL carboxypeptidase 1
Gene Alias CCP4|FECD8
Transcripts ENSG00000273540
Virus HBV
Gene Type protein-coding
HPA Location Info
Membrane Info Disease related genes, Enzymes, Human disease related genes, Potential drug targets, Predicted intracellular proteins
Uniport_ID Q96MI9
HGNC ID HGNC:26504
OMIM ID 615496
Summary Polyglutamylation is a reversible posttranslational modification catalyzed by polyglutamylases that results in the addition of glutamate side chains on the modified protein. This gene encodes a glutamate decarboxylase that catalyzes the deglutamylation of polyglutamylated proteins. Mutations in this gene result in dominant late-onset Fuchs corneal dystrophy. [provided by RefSeq, Nov 2013]
Target gene [AGBL1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1007865 chr15 11 0 13 24 View
1011177 chr15 8 2 0 10 View
1012026 chr15 6 1 0 7 View
1015021 chr15 2 1 0 3 View
1019731 chr15 0 0 0 0 View

Target gene [AGBL1] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - AGBL1 peak across samples

Peak Plot

> Dataset: GSE68402 - AGBL1 peak across samples

Peak Plot

> Dataset: GSE100400 - AGBL1 peak across samples

Peak Plot

> Dataset: GSE131257 - AGBL1 peak across samples

Peak Plot