HBV Target gene Detail Information

> AGBL4 Gene Search Result


Gene Information
Gene Name AGBL4
Gene ID 84871
Gene Full Name AGBL carboxypeptidase 4
Gene Alias CCP6
Transcripts ENSG00000186094
Virus HBV
Gene Type protein-coding
HPA Location Info
Membrane Info Enzymes, Predicted intracellular proteins
Uniport_ID Q5VU57
HGNC ID HGNC:25892
OMIM ID 616476
Summary Predicted to enable metallocarboxypeptidase activity and tubulin binding activity. Predicted to be involved in C-terminal protein deglutamylation; defense response to virus; and protein side chain deglutamylation. Predicted to act upstream of or within several processes, including axonal transport of mitochondrion; positive regulation of ubiquitin-dependent protein catabolic process; and regulation of blastocyst development. Located in Golgi apparatus; centriole; and ciliary basal body. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [AGBL4] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1004547 chr1 76 1 0 77 View
1005507 chr1 46 5 2 53 View
1007481 chr1 26 1 0 27 View
1011951 chr1 8 0 0 8 View
1011974 chr1 3 5 0 8 View
1015332 chr1 2 0 0 2 View
1018252 chr1 0 0 0 0 View
1019094 chr1 0 0 0 0 View
1019913 chr1 0 0 0 0 View
1020734 chr1 2 0 0 2 View
1024033 chr1 3 2 1 6 View
1041673 chr1 2 0 0 2 View
1041674 chr1 6 0 0 6 View
1041675 chr1 0 0 1 1 View
1041676 chr1 1 0 0 1 View

Target gene [AGBL4] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - AGBL4 peak across samples

Peak Plot

> Dataset: GSE68402 - AGBL4 peak across samples

Peak Plot

> Dataset: GSE100400 - AGBL4 peak across samples

Peak Plot

> Dataset: GSE131257 - AGBL4 peak across samples

Peak Plot