HBV Target gene Detail Information

> ANKRD30A Gene Search Result


Gene Information
Gene Name ANKRD30A
Gene ID 91074
Gene Full Name ankyrin repeat domain 30A
Gene Alias NY-BR-1
Transcripts ENSG00000148513
Virus HBV
Gene Type protein-coding
HPA Location Info Nucleoli;
Membrane Info Predicted intracellular proteins
Uniport_ID Q9BXX3
HGNC ID HGNC:17234
OMIM ID 610856
Summary This gene encodes a DNA-binding transcription factor that is uniquely expressed in mammary epithelium and the testis. Altered expression levels have been associated with breast cancer progression. [provided by RefSeq, Nov 2016]
Target gene [ANKRD30A] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1018031 chr10 0 0 0 0 View
1018032 chr10 0 0 0 0 View
1018033 chr10 0 0 0 0 View
1018034 chr10 0 0 0 0 View
1020039 chr10 25 29 79 133 View

Target gene [ANKRD30A] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465
Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402
Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
E
  GSE100400
Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257
ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: GSE100400 - ANKRD30A expression across samples

Volcano Plot


Bar Plot