HTLV1 Target gene Detail Information

> ATXN8OS Gene Search Result


Gene Information
Gene Name ATXN8OS
Gene ID 6315
Gene Full Name ATXN8 opposite strand lncRNA
Gene Alias KLHL1AS|NCRNA00003|SCA8
Transcripts ENSG00000230223
Virus HTLV1
Gene Type ncRNA
HGNC ID HGNC:10561
OMIM ID 603680
lncRNASNP2 ID ATXN8OS
Summary This gene is an antisense transcript to the KLHL1 gene (homolog to the Drosophila KELCH gene); it does not itself appear to be protein coding. A TAC/TGC trinucleotide repeat expansion that is incorporated into this gene transcript, but not the KLHL1 transcript, causes spinocerebellar ataxia type 8. Presumably the expansion interferes with normal antisense function of this transcript. [provided by RefSeq, Oct 2008]
Target gene [ATXN8OS] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6032581 chr13 0 0 0 0 View

Target gene [ATXN8OS] related to Omics data
Data ID Experiment type Sample number Platform
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - ATXN8OS peak across samples

Peak Plot