HBV Target gene Detail Information

> DSCAM Gene Search Result


Gene Information
Gene Name DSCAM
Gene ID 1826
Gene Full Name DS cell adhesion molecule
Gene Alias CHD2|CHD2-42|CHD2-52
Transcripts ENSG00000171587
Virus HBV
Gene Type protein-coding
HPA Location Info Golgi apparatus;Cytosol;Intracellular and membrane;
Membrane Info Plasma proteins, Predicted membrane proteins
Uniport_ID O60469
HGNC ID HGNC:3039
OMIM ID 602523
Summary This gene is a member of the immunoglobulin superfamily of cell adhesion molecules (Ig-CAMs), and is involved in human central and peripheral nervous system development. This gene is a candidate for Down syndrome and congenital heart disease (DSCHD). A gene encoding a similar Ig-CAM protein is located on chromosome 11. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Oct 2012]
Target gene [DSCAM] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1008227 chr21 14 8 0 22 View
1008964 chr21 14 3 1 18 View
1014717 chr21 1 2 0 3 View
1018596 chr21 0 0 0 0 View
1018597 chr21 0 0 0 0 View

Target gene [DSCAM] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE68402 - DSCAM peak across samples

Peak Plot

> Dataset: GSE100400 - DSCAM peak across samples

Peak Plot

> Dataset: GSE131257 - DSCAM peak across samples

Peak Plot