HBV Target gene Detail Information

> FAM157A Gene Search Result


Gene Information
Gene Name FAM157A
Gene ID 728262
Gene Full Name family with sequence similarity 157 member A
Gene Alias GTF2IP18
Transcripts ENSG00000290937
Virus HBV
Gene Type ncRNA
HGNC ID HGNC:34079
Target gene [FAM157A] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1000554 chr3 53 1058 793 1904 View
1002227 chr3 67 187 56 310 View
1002232 chr3 68 184 56 308 View
1002239 chr3 68 183 57 308 View
1002330 chr3 65 172 55 292 View
1002350 chr3 45 165 77 287 View
1002351 chr3 45 165 77 287 View
1002353 chr3 45 165 77 287 View
1002355 chr3 45 165 77 287 View
1002360 chr3 27 242 17 286 View
1002399 chr3 41 162 76 279 View
1002475 chr3 87 124 56 267 View
1002476 chr3 87 125 55 267 View
1002477 chr3 37 156 74 267 View
1002492 chr3 91 124 49 264 View
1002505 chr3 84 125 50 259 View
1002508 chr3 84 119 55 258 View
1002541 chr3 84 124 42 250 View
1002567 chr3 30 138 77 245 View
1002630 chr3 78 103 53 234 View
1003249 chr3 28 115 9 152 View
1008693 chr3 11 8 0 19 View
1009731 chr3 8 6 0 14 View
1020683 chr3 45 165 77 287 View
1021188 chr3 27 242 17 286 View
1021442 chr3 65 172 55 292 View
1021711 chr3 68 184 56 308 View
1021712 chr3 84 124 42 250 View
1021807 chr3 41 162 76 279 View
1022985 chr3 84 125 50 259 View
1023585 chr3 8 6 0 14 View
1023586 chr3 11 8 0 19 View
1041382 chr3 107 233 81 421 View

Target gene [FAM157A] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
GSE131257 ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE100400 - FAM157A peak across samples

Peak Plot