HBV Target gene Detail Information

> FAM242A Gene Search Result


Gene Information
Gene Name FAM242A
Gene ID 105372587
Gene Full Name family with sequence similarity 242 member A
Gene Alias LINC01598
Transcripts ENSG00000231934
Virus HBV
Gene Type ncRNA
HGNC ID HGNC:51597
lncRNASNP2 ID FAM242A
Target gene [FAM242A] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1039901 chr20 0 5 0 5 View
1039902 chr20 0 5 0 5 View
1039903 chr20 0 5 0 5 View

Target gene [FAM242A] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE131257 - FAM242A peak across samples

Peak Plot