HBV Target gene Detail Information

> FSIP2 Gene Search Result


Gene Information
Gene Name FSIP2
Gene ID 401024
Gene Full Name fibrous sheath interacting protein 2
Gene Alias SPGF34
Transcripts ENSG00000188738
Virus HBV
Gene Type protein-coding
HPA Location Info Microtubules;Cytokinetic bridge, Mitotic spindle, Primary cilium, Basal body, Mid piece;
Membrane Info Disease related genes, Human disease related genes, Predicted intracellular proteins
Uniport_ID Q5CZC0
HGNC ID HGNC:21675
OMIM ID 615796
Summary This gene encodes a protein associated with the sperm fibrous sheath. Genes encoding most of the fibrous-sheath associated proteins genes are transcribed only during the postmeiotic period of spermatogenesis. The protein encoded by this gene is specific to spermatogenic cells. Copy number variation in this gene may be associated with testicular germ cell tumors. Pseudogenes associated with this gene are reported on chromosomes 2 and X. [provided by RefSeq, Aug 2016]
Target gene [FSIP2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1008622 chr2 13 1 6 20 View
1008623 chr2 20 0 0 20 View
1008738 chr2 13 1 5 19 View
1008739 chr2 13 1 5 19 View

Target gene [FSIP2] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE68402 - FSIP2 peak across samples

Peak Plot

> Dataset: GSE131257 - FSIP2 peak across samples

Peak Plot