HBV Target gene Detail Information

> IGF2-AS Gene Search Result


Gene Information
Gene Name IGF2-AS
Gene ID 51214
Gene Full Name IGF2 antisense RNA
Gene Alias IGF2-AS1|IGF2AS|PEG8
Transcripts ENSG00000099869
Virus HBV
Gene Type ncRNA
HGNC ID HGNC:14062
OMIM ID 610146
Summary This gene is expressed in antisense to the insulin-like growth factor 2 (IGF2) gene and is imprinted and paternally expressed. It is thought to be non-coding because the putative protein is not conserved and translation is predicted to trigger nonsense mediated decay (NMD). Transcripts from this gene are produced in tumors and may function to suppress cell growth. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Nov 2015]
Target gene [IGF2-AS] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1039038 chr11 101 98 11 210 View
1039039 chr11 103 109 21 233 View
1039040 chr11 103 110 22 235 View
1039041 chr11 104 116 40 260 View
1039042 chr11 105 117 42 264 View
1039043 chr11 106 118 46 270 View
1039044 chr11 107 122 77 306 View
1039045 chr11 108 126 81 315 View
1039046 chr11 109 126 85 320 View
1039047 chr11 111 128 97 336 View
1039048 chr11 112 129 101 342 View
1039049 chr11 118 132 131 381 View
1039050 chr11 121 132 133 386 View
1039051 chr11 127 138 143 408 View
1039052 chr11 127 139 143 409 View
1039053 chr11 128 140 143 411 View
1039054 chr11 153 143 147 443 View

Target gene [IGF2-AS] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
E
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
GSE131257 ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
E
  GSE94660 		RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: GSE100400 - IGF2-AS expression across samples

Volcano Plot

Bar Plot

> Dataset: GSE94660 - IGF2-AS expression across samples

Volcano Plot

Bar Plot