HBV Target gene Detail Information

> LINC00333 Gene Search Result


Gene Information
Gene Name LINC00333
Gene ID 100874128
Gene Full Name long intergenic non-protein coding RNA 333
Gene Alias NCRNA00333
Virus HBV
Gene Type ncRNA
HGNC ID HGNC:42050
Target gene [LINC00333] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1001884 chr13 24 135 276 435 View
1003050 chr13 41 45 85 171 View
1013481 chr13 1 1 3 5 View
1015311 chr13 1 1 0 2 View
1021208 chr13 1 1 0 2 View

Target gene [LINC00333] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE68402 - LINC00333 peak across samples

Peak Plot

> Dataset: GSE131257 - LINC00333 peak across samples

Peak Plot