Gene Name	LINC00486
Gene ID	285045
Gene Full Name	long intergenic non-protein coding RNA 486
Gene Alias	-
Transcripts	ENSG00000230876
Virus	HBV
Gene Type	ncRNA
HGNC ID	HGNC:42946
lncRNASNP2 ID	LINC00486

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1000077	chr2	3594	3662	741	7997	View
1000078	chr2	3594	3662	741	7997	View
1000079	chr2	3594	3662	741	7997	View
1000080	chr2	3594	3662	741	7997	View
1000081	chr2	3616	3615	709	7940	View
1000082	chr2	3596	3557	711	7864	View
1000083	chr2	3587	3549	711	7847	View
1000090	chr2	3497	3487	469	7453	View
1000091	chr2	3358	3354	709	7421	View
1000094	chr2	3323	3268	456	7047	View
1000095	chr2	3323	3265	456	7044	View
1000101	chr2	3262	3175	438	6875	View
1000104	chr2	3070	3111	534	6715	View
1000106	chr2	3137	3047	405	6589	View
1000107	chr2	3139	3033	404	6576	View
1000108	chr2	3122	2996	452	6570	View
1000113	chr2	3124	3018	401	6543	View
1000116	chr2	3091	3014	418	6523	View
1000117	chr2	3095	3014	405	6514	View
1000118	chr2	2938	2915	476	6329	View
1000120	chr2	2935	2905	476	6316	View
1000121	chr2	2868	2822	486	6176	View
1000124	chr2	2876	2713	434	6023	View
1000125	chr2	2876	2713	434	6023	View
1000127	chr2	2869	2706	444	6019	View
1000133	chr2	2677	2660	488	5825	View
1000134	chr2	2671	2656	487	5814	View
1000135	chr2	2636	2642	485	5763	View
1000136	chr2	2628	2639	485	5752	View
1000162	chr2	2275	2298	457	5030	View
1000228	chr2	1681	1741	362	3784	View
1000251	chr2	1550	1626	347	3523	View
1001622	chr2	282	254	37	573	View
1001642	chr2	278	238	37	553	View
1001654	chr2	273	235	36	544	View
1001804	chr2	239	202	36	477	View
1020114	chr2	3140	3039	405	6584	View
1020584	chr2	3082	3014	420	6516	View
1020585	chr2	2657	2650	486	5793	View
1022423	chr2	3616	3615	709	7940	View
1022424	chr2	3587	3549	711	7847	View
1022425	chr2	3497	3487	469	7453	View
1022426	chr2	3262	3175	438	6875	View
1023502	chr2	273	235	36	544	View
1023503	chr2	278	238	37	553	View
1024640	chr2	3616	3615	709	7940	View
1024641	chr2	3593	3649	741	7983	View
1024652	chr2	3616	3611	708	7935	View
1024663	chr2	3138	3031	405	6574	View
1024682	chr2	2872	2705	436	6013	View
1024683	chr2	2783	2753	485	6021	View
1024689	chr2	3566	3549	651	7766	View
1024799	chr2	2489	2506	475	5470	View

Data ID	Experiment type	Sample number	Platform
GSE236281	RNA-seq	12	Illumina MiSeq (Homo sapiens)
C   GSE35465	Chip-seq;RNA-seq	6	Illumina HiSeq 2000 (Homo sapiens)
C   GSE68402	Chip-seq	26	Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV	DNA methylation sequencing;RNA-seq	97	TCGA
GSE224901	RNA-seq	21	Illumina NovaSeq 6000 (Homo sapiens)
GSE100400	Chip-seq;RNA-seq;4C_cccDNA	31	Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897	RNA-seq	95	Illumina HiSeq 4000 (Homo sapiens)
GSE262515	RNA-seq	21	Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345	RNA-seq	4	Illumina HiSeq 2500 (Homo sapiens)
C   GSE131257	ATAC-seq;RNA-seq	19	Illumina HiSeq 2500 (Homo sapiens)
GSE94660	RNA-seq	42	Illumina HiSeq 2500 (Homo sapiens)

• Genome binding/occupancy profiling

When the gene can detect a peak in the dataset, a peak plot will be displayed.

> Dataset: GSE35465 - LINC00486 peak across samples

Peak Plot

> Dataset: GSE68402 - LINC00486 peak across samples

Peak Plot

> Dataset: GSE131257 - LINC00486 peak across samples

Peak Plot