HBV Target gene Detail Information

> LINC01075 Gene Search Result


Gene Information
Gene Name LINC01075
Gene ID 103752583
Gene Full Name long intergenic non-protein coding RNA 1075
Gene Alias -
Virus HBV
Gene Type ncRNA
HGNC ID HGNC:49118
Target gene [LINC01075] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1039247 chr13 11 4 16 31 View
1039248 chr13 11 4 16 31 View
1039249 chr13 11 4 16 31 View
1039250 chr13 11 4 15 30 View
1039251 chr13 11 4 15 30 View
1039252 chr13 11 3 14 28 View
1039253 chr13 11 3 13 27 View
1039254 chr13 11 3 13 27 View
1039255 chr13 10 3 13 26 View
1039256 chr13 10 3 13 26 View
1039257 chr13 10 3 13 26 View
1039258 chr13 10 3 13 26 View
1039259 chr13 10 3 12 25 View
1039260 chr13 10 3 12 25 View
1039261 chr13 10 3 12 25 View
1039262 chr13 8 3 11 22 View
1039263 chr13 8 3 11 22 View
1039264 chr13 8 3 11 22 View

Target gene [LINC01075] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - LINC01075 peak across samples

Peak Plot

> Dataset: GSE68402 - LINC01075 peak across samples

Peak Plot

> Dataset: GSE100400 - LINC01075 peak across samples

Peak Plot

> Dataset: GSE131257 - LINC01075 peak across samples

Peak Plot