HBV Target gene Detail Information

> LINC01106 Gene Search Result


Gene Information
Gene Name LINC01106
Gene ID 151009
Gene Full Name long intergenic non-protein coding RNA 1106
Gene Alias -
Transcripts ENSG00000175772
Virus HBV
Gene Type ncRNA
HGNC ID HGNC:26769
lncRNASNP2 ID LINC01106
Target gene [LINC01106] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1039686 chr2 0 0 0 0 View
1039687 chr2 0 0 0 0 View
1039688 chr2 0 0 0 0 View
1039689 chr2 0 0 0 0 View

Target gene [LINC01106] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
E
  GSE100400
Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
GSE131257 ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: GSE100400 - LINC01106 expression across samples

Volcano Plot


Bar Plot