HPV Target gene Detail Information

> LINC01680 Gene Search Result


Gene Information
Gene Name LINC01680
Gene ID 105371660
Gene Full Name long intergenic non-protein coding RNA 1680
Gene Alias -
Transcripts ENSG00000233882
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:52467
lncRNASNP2 ID LINC01680
Target gene [LINC01680] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5004912 chr1 2 0 0 2 View
5005696 chr1 0 0 0 0 View
5016964 chr1 8 8 2 18 View
5016965 chr1 0 9 1 10 View
5016966 chr1 47 51 6 104 View
5016967 chr1 5 54 6 65 View
5016968 chr1 21 32 9 62 View
5016969 chr1 29 17 8 54 View
5016970 chr1 29 17 7 53 View
5016971 chr1 0 0 0 0 View
5016972 chr1 1 6 0 7 View
5016973 chr1 1 0 1 2 View

Target gene [LINC01680] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE143026 - LINC01680 peak across samples

Peak Plot