HPV Target gene Detail Information

> LINC01689 Gene Search Result


Gene Information
Gene Name LINC01689
Gene ID 101927869
Gene Full Name long intergenic non-protein coding RNA 1689
Gene Alias -
Transcripts ENSG00000224832
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:52476
lncRNASNP2 ID LINC01689
Target gene [LINC01689] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5001970 chr21 16 2 0 18 View
5005004 chr21 0 1 0 1 View

Target gene [LINC01689] related to Omics data
Data ID Experiment type Sample number Platform
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE143026 - LINC01689 peak across samples

Peak Plot