HPV Target gene Detail Information

> LINC01701 Gene Search Result


Gene Information
Gene Name LINC01701
Gene ID 107985456
Gene Full Name long intergenic non-protein coding RNA 1701
Gene Alias -
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:52489
Target gene [LINC01701] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5016959 chr1 1 1 0 2 View
5016960 chr1 0 0 0 0 View
5016961 chr1 12 290 10 312 View
5016962 chr1 2 0 0 2 View
5016963 chr1 0 0 0 0 View

Target gene [LINC01701] related to Omics data
Data ID Experiment type Sample number Platform
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - LINC01701 peak across samples

Peak Plot

> Dataset: GSE143026 - LINC01701 peak across samples

Peak Plot