HPV Target gene Detail Information

> LINC01748 Gene Search Result


Gene Information
Gene Name LINC01748
Gene ID 105378763
Gene Full Name long intergenic non-protein coding RNA 1748
Gene Alias -
Transcripts ENSG00000226476
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:52535
lncRNASNP2 ID LINC01748
Target gene [LINC01748] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5005991 chr1 9 9 6 24 View

Target gene [LINC01748] related to Omics data
Data ID Experiment type Sample number Platform
E
  TCGA_CESC 		DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: TCGA_CESC - LINC01748 expression across samples

Volcano Plot

Bar Plot