HPV Target gene Detail Information

> LINC01781 Gene Search Result


Gene Information
Gene Name LINC01781
Gene ID 101927412
Gene Full Name long intergenic non-protein coding RNA 1781
Gene Alias -
Transcripts ENSG00000234184
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:52571
Target gene [LINC01781] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5005575 chr1 0 5 0 5 View
5006235 chr1 12 7 0 19 View
5006728 chr1 7 6 1 14 View
5009753 chr1 49 27 16 92 View
5010707 chr1 0 1 0 1 View
5011483 chr1 1 0 0 1 View
5011863 chr1 0 2 0 2 View

Target gene [LINC01781] related to Omics data
Data ID Experiment type Sample number Platform
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE183048
Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE143026
ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
S
  GSE164690
scRNA-seq 51 Illumina NextSeq 500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a feature/violin plot will be displayed.


> Dataset: GSE164690 - Gene expression in cell subsets