Gene Information
Target gene [LINC01821] related to VISs
Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section
| DVID |
Chromosome |
HM |
TFBS |
CA |
Sum of Overlapped Records |
Detail |
| 1004710 |
chr2 |
50 |
19 |
2 |
71 |
View |
| 1014711 |
chr2 |
2 |
1 |
0 |
3 |
View |
Target gene [LINC01821] related to Omics data
| Data ID |
Experiment type |
Sample number |
Platform |
|
C GSE35465
|
Chip-seq;RNA-seq |
6 |
Illumina HiSeq 2000 (Homo sapiens) |
|
C GSE68402
|
Chip-seq |
26 |
Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens) |
|
TCGA_LIHC_HBV
|
DNA methylation sequencing;RNA-seq |
97 |
TCGA |
|
GSE224901
|
RNA-seq |
21 |
Illumina NovaSeq 6000 (Homo sapiens) |
|
C GSE100400
|
Chip-seq;RNA-seq;4C_cccDNA |
31 |
Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus) |
|
C GSE131257
|
ATAC-seq;RNA-seq |
19 |
Illumina HiSeq 2500 (Homo sapiens) |
When the gene can detect a peak in the dataset, a peak plot will be displayed.
> Dataset: GSE35465 - LINC01821 peak across samples
|
Peak Plot
|
> Dataset: GSE68402 - LINC01821 peak across samples
|
Peak Plot
|
> Dataset: GSE100400 - LINC01821 peak across samples
|
Peak Plot
|
> Dataset: GSE131257 - LINC01821 peak across samples
|
Peak Plot
|
HBV Target gene Detail Information
