HBV Target gene Detail Information

> LINC01898 Gene Search Result


Gene Information
Gene Name LINC01898
Gene ID 100505853
Gene Full Name long intergenic non-protein coding RNA 1898
Gene Alias -
Transcripts ENSG00000261194
Virus HBV
Gene Type ncRNA
HGNC ID HGNC:52717
lncRNASNP2 ID LINC01898
Target gene [LINC01898] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1003891 chr18 101 2 0 103 View

Target gene [LINC01898] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - LINC01898 peak across samples

Peak Plot

> Dataset: GSE68402 - LINC01898 peak across samples

Peak Plot

> Dataset: GSE100400 - LINC01898 peak across samples

Peak Plot

> Dataset: GSE131257 - LINC01898 peak across samples

Peak Plot