HBV Target gene Detail Information

> LINC02112 Gene Search Result


Gene Information
Gene Name LINC02112
Gene ID 285692
Gene Full Name long intergenic non-protein coding RNA 2112
Gene Alias -
Transcripts ENSG00000249781
Virus HBV
Gene Type ncRNA
HGNC ID HGNC:27756
lncRNASNP2 ID LINC02112
Target gene [LINC02112] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1004802 chr5 10 5 53 68 View
1006034 chr5 43 1 0 44 View
1006035 chr5 43 1 0 44 View
1022372 chr5 10 5 53 68 View

Target gene [LINC02112] related to Omics data
Data ID Experiment type Sample number Platform
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE131257 - LINC02112 peak across samples

Peak Plot