HBV Target gene Detail Information

> LINC02161 Gene Search Result


Gene Information
Gene Name LINC02161
Gene ID 105379076
Gene Full Name long intergenic non-protein coding RNA 2161
Gene Alias -
Virus HBV
Gene Type ncRNA
HGNC ID HGNC:53022
Target gene [LINC02161] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1010317 chr5 11 1 0 12 View

Target gene [LINC02161] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE68402 - LINC02161 peak across samples

Peak Plot

> Dataset: GSE100400 - LINC02161 peak across samples

Peak Plot