HPV Target gene Detail Information

> LINC02162 Gene Search Result


Gene Information
Gene Name LINC02162
Gene ID 105374624
Gene Full Name long intergenic non-protein coding RNA 2162
Gene Alias -
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:53023
Target gene [LINC02162] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5017664 chr5 1 0 25 26 View
5017665 chr5 11 25 13 49 View
5017666 chr5 5 2 0 7 View
5017667 chr5 1 1 8 10 View
5017668 chr5 145 24 20 189 View
5017669 chr5 1 0 0 1 View
5017670 chr5 19 2 0 21 View
5017671 chr5 14 0 0 14 View
5017672 chr5 1 0 0 1 View

Target gene [LINC02162] related to Omics data
Data ID Experiment type Sample number Platform
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - LINC02162 peak across samples

Peak Plot

> Dataset: GSE143026 - LINC02162 peak across samples

Peak Plot