HPV Target gene Detail Information

> LINC02207 Gene Search Result


Gene Information
Gene Name LINC02207
Gene ID 101927153
Gene Full Name long intergenic non-protein coding RNA 2207
Gene Alias -
Transcripts ENSG00000258476
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:53073
lncRNASNP2 ID LINC02207
Target gene [LINC02207] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5005826 chr15 3 14 8 25 View

Target gene [LINC02207] related to Omics data
Data ID Experiment type Sample number Platform
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
GSE164690 scRNA-seq 51 Illumina NextSeq 500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - LINC02207 peak across samples

Peak Plot

> Dataset: GSE143026 - LINC02207 peak across samples

Peak Plot