HPV Target gene Detail Information

> LINC02500 Gene Search Result


Gene Information
Gene Name LINC02500
Gene ID 101928679
Gene Full Name long intergenic non-protein coding RNA 2500
Gene Alias -
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:53488
Target gene [LINC02500] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5017648 chr4 4 3 0 7 View
5017649 chr4 1 0 0 1 View
5017650 chr4 5 7 0 12 View
5017651 chr4 0 0 0 0 View
5017652 chr4 2 0 0 2 View
5017653 chr4 7 3 1 11 View
5017654 chr4 9 1 1 11 View
5017655 chr4 9 1 1 11 View
5017657 chr4 0 1 0 1 View
5017658 chr4 0 2 0 2 View

Target gene [LINC02500] related to Omics data
Data ID Experiment type Sample number Platform
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE143026 - LINC02500 peak across samples

Peak Plot