HPV Target gene Detail Information

> LINC02548 Gene Search Result


Gene Information
Gene Name LINC02548
Gene ID 105376562
Gene Full Name long intergenic non-protein coding RNA 2548
Gene Alias -
Transcripts ENSG00000255411
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:53583
lncRNASNP2 ID LINC02548
Target gene [LINC02548] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5014771 chr11 0 0 0 0 View

Target gene [LINC02548] related to Omics data
Data ID Experiment type Sample number Platform
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE143026 - LINC02548 peak across samples

Peak Plot