HBV Target gene Detail Information

> LNCOG Gene Search Result


Gene Information
Gene Name LNCOG
Gene ID 105369848
Gene Full Name lncRNA osteogenesis associated
Gene Alias LINC02407|lncRNA-OG
Transcripts ENSG00000257219
Virus HBV
Gene Type ncRNA
HGNC ID HGNC:53336
Target gene [LNCOG] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1006550 chr12 20 11 9 40 View
1009961 chr12 3 4 7 14 View
1009986 chr12 3 4 7 14 View

Target gene [LNCOG] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE68402 - LNCOG peak across samples

Peak Plot

> Dataset: GSE131257 - LNCOG peak across samples

Peak Plot