HPV Target gene Detail Information

> LNCSRLR Gene Search Result


Gene Information
Gene Name LNCSRLR
Gene ID 109729161
Gene Full Name lncRNA sorafenib resistance in renal cell carcinoma associated
Gene Alias lncRNA-SRLR
Transcripts ENSG00000240032
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:52753
lncRNASNP2 ID LNCSRLR
Target gene [LNCSRLR] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5004833 chr3 1 21 0 22 View
5005603 chr3 72 191 39 302 View
5006491 chr3 0 0 0 0 View

Target gene [LNCSRLR] related to Omics data
Data ID Experiment type Sample number Platform
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE143026 - LNCSRLR peak across samples

Peak Plot