HPV Target gene Detail Information

> LSINCT5 Gene Search Result


Gene Information
Gene Name LSINCT5
Gene ID 101234261
Gene Full Name long stress-induced non-coding transcript 5
Gene Alias -
Transcripts ENSG00000281560
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:37824
OMIM ID 615764
Target gene [LSINCT5] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5010301 chr5 15 52 0 67 View
5010449 chr5 9 19 0 28 View
5011972 chr5 48 79 0 127 View

Target gene [LSINCT5] related to Omics data
Data ID Experiment type Sample number Platform
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - LSINCT5 peak across samples

Peak Plot

> Dataset: GSE143026 - LSINCT5 peak across samples

Peak Plot