Gene Information
|
Gene Name
|
MYOCD |
|
Gene ID
|
93649
|
|
Gene Full Name
|
myocardin |
|
Gene Alias
|
MGBL|MYCD |
|
Transcripts
|
ENSG00000141052
|
|
Virus
|
HBV |
|
Gene Type
|
protein-coding |
|
HPA Location Info
|
Nucleoplasm; 
|
|
Membrane Info
|
Cancer-related genes, Disease related genes, Human disease related genes, Plasma proteins, Predicted intracellular proteins |
|
Uniport_ID
|
Q8IZQ8
|
|
HGNC ID
|
HGNC:16067
|
|
OMIM ID
|
606127 |
|
Summary
|
This gene encodes a nuclear protein, which is expressed in heart, aorta, and in smooth muscle cell-containing tissues. It functions as a transcriptional co-activator of serum response factor (SRF) and modulates expression of cardiac and smooth muscle-specific SRF-target genes, and thus may play a crucial role in cardiogenesis and differentiation of the smooth muscle cell lineage. Alternatively spliced transcript variants encoding different isoforms have been found for this gene.[provided by RefSeq, Sep 2009] |
Target gene [MYOCD] related to VISs 
Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section
| DVID |
Chromosome |
HM |
TFBS |
CA |
Sum of Overlapped Records |
Detail |
| 1013752 |
chr17 |
3 |
1 |
0 |
4 |
View |
| 1018010 |
chr17 |
0 |
0 |
0 |
0 |
View |
| 1020676 |
chr17 |
0 |
0 |
0 |
0 |
View |
| 1021673 |
chr17 |
3 |
1 |
0 |
4 |
View |
| 1042235 |
chr17 |
9 |
3 |
0 |
12 |
View |
| 1042236 |
chr17 |
0 |
0 |
0 |
0 |
View |
Target gene [MYOCD] related to Omics data
| Data ID |
Experiment type |
Sample number |
Platform |
|
GSE236281
|
RNA-seq |
12 |
Illumina MiSeq (Homo sapiens) |
|
C GSE35465
|
Chip-seq;RNA-seq |
6 |
Illumina HiSeq 2000 (Homo sapiens) |
|
C GSE68402
|
Chip-seq |
26 |
Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens) |
|
TCGA_LIHC_HBV
|
DNA methylation sequencing;RNA-seq |
97 |
TCGA |
|
GSE224901
|
RNA-seq |
21 |
Illumina NovaSeq 6000 (Homo sapiens) |
|
C GSE100400
|
Chip-seq;RNA-seq;4C_cccDNA |
31 |
Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus) |
|
GSE173897
|
RNA-seq |
95 |
Illumina HiSeq 4000 (Homo sapiens) |
|
GSE262515
|
RNA-seq |
21 |
Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus) |
|
GSE110345
|
RNA-seq |
4 |
Illumina HiSeq 2500 (Homo sapiens) |
|
C GSE131257
|
ATAC-seq;RNA-seq |
19 |
Illumina HiSeq 2500 (Homo sapiens) |
|
GSE94660
|
RNA-seq |
42 |
Illumina HiSeq 2500 (Homo sapiens) |
When the gene can detect a peak in the dataset, a peak plot will be displayed.
> Dataset: GSE35465 - MYOCD peak across samples
|
Peak Plot
|
> Dataset: GSE68402 - MYOCD peak across samples
|
Peak Plot
|
> Dataset: GSE100400 - MYOCD peak across samples
|
Peak Plot
|
> Dataset: GSE131257 - MYOCD peak across samples
|
Peak Plot
|
|
|
HBV Target gene Detail Information
