HBV Target gene Detail Information

> NT5C1B-RDH14 Gene Search Result


Gene Information
Gene Name NT5C1B-RDH14
Gene ID 100526794
Gene Full Name NT5C1B-RDH14 readthrough
Gene Alias AIRP|NT5C1B|cN-IB|cN1B
Transcripts ENSG00000250741
Virus HBV
Gene Type protein-coding
HPA Location Info Nucleoplasm, Plasma membrane;Nucleoli, Connecting piece, Mid piece;
Membrane Info Metabolic proteins, Predicted intracellular proteins
HGNC ID HGNC:38831
Summary This locus represents naturally occurring read-through transcription between the neighboring NT5C1B (5'-nucleotidase, cytosolic IB) and RDH14 (retinol dehydrogenase 14) genes on chromosome 2. Alternative splicing results in multiple transcript variants, one of which encodes a fusion protein that shares sequence identity with the products of each individual gene. [provided by RefSeq, Nov 2010]
Target gene [NT5C1B-RDH14] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1020034 chr2 3 3 0 6 View

Target gene [NT5C1B-RDH14] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
GSE131257 ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)