HBV Target gene Detail Information

> PSPHP1 Gene Search Result


Gene Information
Gene Name PSPHP1
Gene ID 8781
Gene Full Name phosphoserine phosphatase pseudogene 1
Gene Alias CO9|PSPHL
Transcripts ENSG00000226278
Virus HBV
Gene Type pseudo
HGNC ID HGNC:9578
OMIM ID 604239
Summary This gene is significantly upregulated in Fanconi's anemia fibroblasts but downregulated or absent in fibroblasts from normal donors. It is also highly expressed in FA B-cells of complementation group A. [provided by RefSeq, Jul 2008]
Target gene [PSPHP1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1012818 chr7 5 1 0 6 View

Target gene [PSPHP1] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
GSE199850 scRNA-seq 1 HiSeq X Ten (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
GSE131257 ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)