HPV Target gene Detail Information

> PTCSC2 Gene Search Result


Gene Information
Gene Name PTCSC2
Gene ID 101928337
Gene Full Name papillary thyroid carcinoma susceptibility candidate 2
Gene Alias -
Transcripts ENSG00000236130
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:44086
lncRNASNP2 ID PTCSC2
Target gene [PTCSC2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5001225 chr9 41 2 0 43 View
5001859 chr9 19 2 0 21 View
5001898 chr9 18 2 0 20 View
5016859 chr9 0 1 0 1 View
5016860 chr9 0 0 0 0 View

Target gene [PTCSC2] related to Omics data
Data ID Experiment type Sample number Platform
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - PTCSC2 peak across samples

Peak Plot

> Dataset: GSE143026 - PTCSC2 peak across samples

Peak Plot