HPV Target gene Detail Information

> RNA45SN1 Gene Search Result


Gene Information
Gene Name RNA45SN1
Gene ID 106631777
Gene Full Name RNA, 45S pre-ribosomal N1
Gene Alias RNA45S4
Virus HPV
Gene Type rRNA
HGNC ID HGNC:53514
Summary 45S ribosomal DNA (rDNA) arrays, or clusters, are present on human chromosomes 13, 14, 15, 21 and 22, designated RNR1 through RNR5, respectively. Each cluster consists of multiple 45S rDNA repeat units that vary in number among individuals and chromosomes, with total diploid copy number estimates ranging from 60 to >800 repeat units in a human genome. The 45S rDNA repeat unit encodes a 45S rRNA precursor, transcribed by RNA polymerase I, which is processed to form the 18S, 5.8S and 28S rRNAs. Gene and RefSeq, in collaboration with HGNC, currently describe one 45S rDNA cluster, and one set of 45S precursor and product rRNAs, for each of the five human chromosomes to which these loci are localized. This gene is a representative copy of the 45S pre-ribosomal RNA on chromosome 21. [provided by RefSeq, Feb 2017]
Target gene [RNA45SN1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5015700 chr21 0 0 0 0 View

Target gene [RNA45SN1] related to Omics data
Data ID Experiment type Sample number Platform
GSE143026 ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)