HBV Target gene Detail Information

> RPL13AP5 Gene Search Result


Gene Information
Gene Name RPL13AP5
Gene ID 728658
Gene Full Name ribosomal protein L13a pseudogene 5
Gene Alias RPL13A_8_1086|bA196N24.2
Transcripts ENSG00000236552
Virus HBV
Gene Type pseudo
HGNC ID HGNC:23736
Target gene [RPL13AP5] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1039025 chr10 39 25 0 64 View
1039026 chr10 39 25 0 64 View
1039027 chr10 39 25 0 64 View
1039028 chr10 39 25 0 64 View
1039029 chr10 39 25 0 64 View
1039030 chr10 39 25 0 64 View
1039031 chr10 39 25 0 64 View
1039032 chr10 39 25 0 64 View
1039033 chr10 39 25 0 64 View
1039034 chr10 39 25 0 64 View
1039035 chr10 39 26 0 65 View
1039036 chr10 39 26 0 65 View

Target gene [RPL13AP5] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
GSE199850 scRNA-seq 1 HiSeq X Ten (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
E
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
GSE131257 ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: GSE100400 - RPL13AP5 expression across samples

Volcano Plot

Bar Plot