HBV Target gene Detail Information

> SCGB1C1 Gene Search Result


Gene Information
Gene Name SCGB1C1
Gene ID 147199
Gene Full Name secretoglobin family 1C member 1
Gene Alias RYD5
Transcripts ENSG00000188076
Virus HBV
Gene Type protein-coding
HPA Location Info Secreted - unknown location;
Membrane Info Predicted secreted proteins
Uniport_ID Q8TD33
HGNC ID HGNC:18394
OMIM ID 610176
Summary Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [SCGB1C1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1000970 chr11 516 590 206 1312 View
1001483 chr11 404 231 35 670 View
1001492 chr11 401 226 36 663 View
1014759 chr11 3 0 0 3 View
1014760 chr11 3 0 0 3 View
1022467 chr11 401 227 36 664 View
1022468 chr11 407 278 24 709 View
1022469 chr11 385 219 42 646 View
1023705 chr11 404 268 24 696 View
1023706 chr11 391 217 38 646 View

Target gene [SCGB1C1] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
GSE131257 ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE100400 - SCGB1C1 peak across samples

Peak Plot