HBV Target gene Detail Information

> SH3RF3 Gene Search Result


Gene Information
Gene Name SH3RF3
Gene ID 344558
Gene Full Name SH3 domain containing ring finger 3
Gene Alias POSH2|SH3MD4
Transcripts ENSG00000172985
Virus HBV
Gene Type protein-coding
HPA Location Info Nucleoplasm;
Membrane Info Enzymes, Metabolic proteins, Predicted intracellular proteins
Uniport_ID Q8TEJ3
HGNC ID HGNC:24699
OMIM ID 618933
Summary Enables ubiquitin protein ligase activity. Involved in positive regulation of JNK cascade and protein autoubiquitination. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [SH3RF3] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1001206 chr2 546 364 11 921 View
1001207 chr2 546 363 11 920 View
1001240 chr2 493 363 11 867 View
1001248 chr2 490 356 11 857 View
1001258 chr2 527 306 11 844 View
1001273 chr2 518 302 11 831 View
1001407 chr2 464 255 9 728 View
1001423 chr2 433 271 9 713 View
1001519 chr2 419 226 2 647 View
1001545 chr2 408 220 2 630 View
1001690 chr2 341 181 0 522 View
1001712 chr2 341 177 0 518 View
1001773 chr2 314 171 2 487 View
1002105 chr2 225 117 0 342 View
1002395 chr2 203 76 1 280 View
1002396 chr2 203 76 1 280 View
1002727 chr2 153 60 1 214 View
1003599 chr2 95 27 0 122 View
1003614 chr2 94 27 0 121 View
1003732 chr2 89 24 0 113 View
1003844 chr2 84 21 0 105 View
1004161 chr2 72 18 0 90 View
1004748 chr2 62 8 0 70 View
1005035 chr2 59 4 0 63 View
1005036 chr2 59 4 0 63 View
1005106 chr2 58 3 0 61 View
1005387 chr2 53 2 0 55 View
1005764 chr2 44 4 0 48 View

Target gene [SH3RF3] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
GSE131257 ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - SH3RF3 peak across samples

Peak Plot

> Dataset: GSE68402 - SH3RF3 peak across samples

Peak Plot