HBV Target gene Detail Information

> SLC22A16 Gene Search Result


Gene Information
Gene Name SLC22A16
Gene ID 85413
Gene Full Name solute carrier family 22 member 16
Gene Alias CT2|FLIPT2|HEL-S-18|OAT6|OCT6|OKB1|dJ261K5.1
Transcripts ENSG00000004809
Virus HBV
Gene Type protein-coding
HPA Location Info Plasma membrane, Cytosol;
Membrane Info Metabolic proteins, Predicted membrane proteins, Transporters
Uniport_ID Q86VW1
HGNC ID HGNC:20302
OMIM ID 608276
Summary This gene encodes a member of the organic zwitterion transporter protein family which transports carnitine. The encoded protein has also been shown to transport anticancer drugs like bleomycin (PMID: 20037140) successful treatment has been correlated with the level of activity of this transporter in tumor cells. [provided by RefSeq, Dec 2011]
Target gene [SLC22A16] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1020428 chr6 8 3 5 16 View

Target gene [SLC22A16] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - SLC22A16 peak across samples

Peak Plot

> Dataset: GSE68402 - SLC22A16 peak across samples

Peak Plot

> Dataset: GSE131257 - SLC22A16 peak across samples

Peak Plot