HBV Target gene Detail Information

> SLC5A8 Gene Search Result


Gene Information
Gene Name SLC5A8
Gene ID 160728
Gene Full Name solute carrier family 5 member 8
Gene Alias AIT|SMCT|SMCT1
Transcripts ENSG00000256870
Virus HBV
Gene Type protein-coding
HPA Location Info
Membrane Info Metabolic proteins, Predicted membrane proteins, Transporters
Uniport_ID Q8N695
HGNC ID HGNC:19119
OMIM ID 608044
Summary SLC5A8 has been shown to transport iodide by a passive mechanism (Rodriguez et al., 2002 [PubMed 12107270]) and monocarboxylates and short-chain fatty acids by a sodium-coupled mechanism (Gopal et al., 2004 [PubMed 15322102]). In kidney, SLC5A8 functions as a high-affinity sodium-coupled lactate transporter involved in reabsorption of lactate and maintenance of blood lactate levels (Thangaraju et al., 2006 [PubMed 16873376]).[supplied by OMIM, Dec 2008]
Target gene [SLC5A8] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1015429 chr12 2 0 0 2 View
1015430 chr12 2 0 0 2 View
1015769 chr12 1 0 1 2 View
1017013 chr12 1 0 0 1 View
1017014 chr12 1 0 0 1 View
1017015 chr12 1 0 0 1 View

Target gene [SLC5A8] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
GSE199850 scRNA-seq 1 HiSeq X Ten (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE100400 - SLC5A8 peak across samples

Peak Plot

> Dataset: GSE131257 - SLC5A8 peak across samples

Peak Plot