HPV Target gene Detail Information

> SMILR Gene Search Result


Gene Information
Gene Name SMILR
Gene ID 105375734
Gene Full Name smooth muscle induced lncRNA, enhancer of proliferation
Gene Alias -
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:51825
Target gene [SMILR] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5005632 chr8 1 0 0 1 View
5010219 chr8 9 4 0 13 View

Target gene [SMILR] related to Omics data
Data ID Experiment type Sample number Platform
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - SMILR peak across samples

Peak Plot

> Dataset: GSE143026 - SMILR peak across samples

Peak Plot